BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A07LP1|AL427557
(261 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 509 e-144
>3x_Contig1461
Length = 5478
Score = 509 bits (254), Expect = e-144
Identities = 257/260 (98%)
Strand = Plus / Minus
Query: 2 gcagcgggaacagtgataatgtgttcctaaactgtgtgatgatatgcgaacgtatcatta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 gcagcgggaacagtgataatgtgttcctaaactgtgtgatgatatgcgaacgtatcatta 3419
Query: 62 atgaaatgrcttatttgaaatgcaatttaacatttacaccttaaaagttgtgatatgttc 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 atgaaatgacttatttgaaatgcaatttaacatttacaccttaaaagttgtgatatgttc 3359
Query: 122 tagaaggatgaatcctcaaatacatccatttagtggttgggataaaaaamaattacaaat 181
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3358 tagaaggatgaatcctcaaatacatccatttagtggttgggataaaaaacaattacaaat 3299
Query: 182 gaagagaatttagggttaagtacatgaaatataagtcaaacagtgtagaaagatgcatga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3298 gaagagaatttagggttaagtacatgaaatataagtcaaacagtgtagaaagatgcatga 3239
Query: 242 tatggaaacargatacaaaa 261
|||||||||| |||||||||
Sbjct: 3238 tatggaaacaagatacaaaa 3219
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1804
Number of Sequences: 1807
Number of extensions: 1804
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 261
length of database: 10,358,551
effective HSP length: 15
effective length of query: 246
effective length of database: 10,331,446
effective search space: 2541535716
effective search space used: 2541535716
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.6 bits)